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Dassault Systemes libdock module
Libdock Module, supplied by Dassault Systemes, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/libdock/libdock+module/pm42251046-471-7-13
Average 86 stars, based on 1 article reviews
libdock module - by Bioz Stars, 2026-10
86/100 stars

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Article Title: Artesunate, an Anti-Malaria Agent, Attenuates Experimental Osteoarthritis by Inhibiting Bone Resorption and CD31 hi Emcn hi Vessel Formation in Subchondral Bone
Article Snippet: Molecular docking was executed for accurate docking of the ligand into the protein active sites using the LibDock module in Discovery Studio (Dassault Systèmes BIOVIA, Discovery Studio Modeling Environment, Release 2017, San Diego: Dassault Systèmes, 2016).

Article Title: Identification of hepta-histidine as a candidate drug for Huntington’s disease by in silico-in vitro- in vivo -integrated screens of chemical libraries
Article Snippet: We retrieved the structure of Ku70 (ID: PD0220) from the Protein Data Bank (PDB) ( http://www.rcsb.org/pdb/explore/explore.do?structureid=1JEY ) and screened 3,010,121 chemicals in Chemical Available Purchase (CAP) 2006 (Dassault Systems BIOVIA Cooperation, San Diego) using LibDock.

Article Title: Tomatidine and Patchouli Alcohol as Inhibitors of SARS-CoV-2 Enzymes (3CLpro, PLpro and NSP15) by Molecular Docking and Molecular Dynamics Simulations
Article Snippet: Docking of protein ligands was carried out using AutoDock Vina [ ], GOLD [ , ] and LibDock from Discovery Studio Client v20.1.0.19295 (DS) [Dassault Systemes, BIOVIA Corp., San Diego, CA, USA, v 20.1].

Article Title: ATP-Binding Cassette Exporter PDR11-Mediated Terpenoid Secretion in Engineered Yeast.
Article Snippet: The metabolic burden caused by terpenoid accumulation limits the development of highly efficient microbial cell factories, which can be circumvented using exporter-mediated product secretion.. Although our previous study showed that the pleiotropic drug resistance exporter (PDR11) mediates the export of rubusoside in Saccharomyces cerevisiae, the underlying mechanism is still unclear.. Herein, we used GROMACS software to simulate PDR11-mediated rubusoside recruitment and found six residues (D116, D167, Y168, P521, R663, and L1146) on PDR11 that are critical for this process.

Protein-Protein interactions:

Article Title: Multiprotein blends-regulated high-moisture extruded seafood analogs: texture, structure, and flavor profile.
Article Snippet: High-moisture extrusion (HME) is a promising technology for producing plant-based seafood analogs (PBSAs); however, achieving desirable texture and minimizing off-flavors remain major challenges.. In this study, HMEPBSAs were prepared using soybean protein isolate (SPI) and wheat gluten (WG) as the base, with SPI partially replaced by rice protein isolate (RPI), yeast protein (YP), mung bean protein isolate (MPI), pea protein isolate (PPI), or peanut protein isolate (NPI).. Results demonstrated that protein source significantly affected rheological behavior, fibrous structure, texture, and flavor retention.



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